PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP021558.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ERF

Protein Properties

Length: 911aa MW: 101025 Da PI: 5.3688

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP021558.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	58.4	1.8e-18	691	740	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f t e Aa a+++a+++++g PCP021558.1 691 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETDEAAALAYDEAALRFKG 740 7******.******94....45*********************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 911 aa Download sequence
MGNCFSNDAG GMSAVGGTAA SHANPYDAPN DAVDLFLRSR GYHGLFSQIE VAVWIGLLSS 60 VNLNLMALEL KTVVMHAIDA NVVKNIKKEL ELISLAAIDL RDRDVLSKSD PMVVIYTKGR 120 DGGLSELGRT EVVLNSLNPK WITKQNITYH FEVVQTLVFR VYDVDTQFHN VEVKMLQLEE 180 QQFLGEATCA LSEIVTKSDR LLTLNLEYRE ELDRPNPHRD RGKLIVHAEE SVSSKTAIEM 240 SLRCLDLEYK DLFSKSDPFL VISKLAESGI TIPVCKTEVI KNELKPSWKP VYINIQQVGS 300 KDSPLIMECF NFNNNGKHDL IGKIQKSLAE LEKLHSSGQG ENLFLPTTVG HDSHNKVLKS 360 QLFVDKFTET VQHTFLDYLA GGYELNFMVA VDFTASNGNS RLPDSLHYID PTGRPNAYQR 420 AIIEVVEVLQ FYDSDKRFPA WGFGARPIDG PVSHCFNLNG SSHHCEVEGI QGIMTAYASA 480 LQNVSLAGPT LFGPVITNAA LNASQSVANG GRKYFVLLII TDGVVTDHQE TKDALVKASD 540 LPLSILIVGV GGADFKEMEI LDADKGERLE SSTGRVASRD IVQFVPFRDV QSYKVDRKHG 600 KRSFPGDEPE AKEEDHRMIF EPFFSSARSQ HEMSAMVSAL SQVLGSTNNQ TPAVQVPMEP 660 PLIAPQSSAM ESHDDQSPPQ ARDQGTARRR HYRGVRQRPW GKWAAEIRDP KKAARVWLGT 720 FETDEAAALA YDEAALRFKG SKAKLNFPER VQGRITELGS LTATSTQQNL PAGASQRVIT 780 DHHHPLSDHQ YHLQAFPNNV VTPPHDQYAQ YFRSGHECIS YDLPATLYER ERFATQTSET 840 TTSSSSLLPF LPSHQQEDQQ HPLGYSMPGF GSSSSSSNPP PTVDLDKIIS TDTELLDDLL 900 EELEVEAEED A

Sequence ? help Back to Top

Protein Sequence Length: 911 aa Download sequence

MGNCFSNDAG GMSAVGGTAA SHANPYDAPN DAVDLFLRSR GYHGLFSQIE VAVWIGLLSS  60
VNLNLMALEL KTVVMHAIDA NVVKNIKKEL ELISLAAIDL RDRDVLSKSD PMVVIYTKGR  120
DGGLSELGRT EVVLNSLNPK WITKQNITYH FEVVQTLVFR VYDVDTQFHN VEVKMLQLEE  180
QQFLGEATCA LSEIVTKSDR LLTLNLEYRE ELDRPNPHRD RGKLIVHAEE SVSSKTAIEM  240
SLRCLDLEYK DLFSKSDPFL VISKLAESGI TIPVCKTEVI KNELKPSWKP VYINIQQVGS  300
KDSPLIMECF NFNNNGKHDL IGKIQKSLAE LEKLHSSGQG ENLFLPTTVG HDSHNKVLKS  360
QLFVDKFTET VQHTFLDYLA GGYELNFMVA VDFTASNGNS RLPDSLHYID PTGRPNAYQR  420
AIIEVVEVLQ FYDSDKRFPA WGFGARPIDG PVSHCFNLNG SSHHCEVEGI QGIMTAYASA  480
LQNVSLAGPT LFGPVITNAA LNASQSVANG GRKYFVLLII TDGVVTDHQE TKDALVKASD  540
LPLSILIVGV GGADFKEMEI LDADKGERLE SSTGRVASRD IVQFVPFRDV QSYKVDRKHG  600
KRSFPGDEPE AKEEDHRMIF EPFFSSARSQ HEMSAMVSAL SQVLGSTNNQ TPAVQVPMEP  660
PLIAPQSSAM ESHDDQSPPQ ARDQGTARRR HYRGVRQRPW GKWAAEIRDP KKAARVWLGT  720
FETDEAAALA YDEAALRFKG SKAKLNFPER VQGRITELGS LTATSTQQNL PAGASQRVIT  780
DHHHPLSDHQ YHLQAFPNNV VTPPHDQYAQ YFRSGHECIS YDLPATLYER ERFATQTSET  840
TTSSSSLLPF LPSHQQEDQQ HPLGYSMPGF GSSSSSSNPP PTVDLDKIIS TDTELLDDLL  900
EELEVEAEED A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07310.1	8e-44	ERF family protein