PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP021617.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family DBB
Protein Properties Length: 260aa    MW: 27833.6 Da    PI: 5.1261
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP021617.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box20.31.1e-06447542
     zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
                  C+ +e  e++  C  ++  lC  C ++ Hk       H++vpl
  PCP021617.1  4 QCNVCEAAEANVLCCADEAALCWACDEKVHKAnklaskHQRVPL 47
                 7******99*********************88999999*99986 PP
2zf-B_box27.94.9e-095292337
     zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37
                 ++kC+ ++e    +fC +++ llC++C ++ H        H
  PCP021617.1 52 MPKCDICQEAVGYFFCLEDRALLCRKCDVSVHTAnsfvsaH 92
                 799*******9*********************554555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MKIQCNVCEA AEANVLCCAD EAALCWACDE KVHKANKLAS KHQRVPLCSS HMPKCDICQE  60
AVGYFFCLED RALLCRKCDV SVHTANSFVS AHRRFLLTGI KVGPEPAEPD SGGVNGVCVG  120
ASSTVKLHSG SASVSRCETH NPLPVECKAG APPGGGISFN GGSAAGSVPQ CYIDEFLGFS  180
DLDQSFDYID NGSSKADCSK LGGYDSPVLR SSVEELEDYE CIGEVPETSW MVPQFLMQLG  240
CQGGGILIRL RYRHPAVLFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78600.12e-72DBB family protein