PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP021634.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 399aa MW: 43213.5 Da PI: 4.9888

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP021634.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.1	1.6e-13	130	180	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r++h +Er+RR+++N+ + Lr+l+P + k+ + a+i +v+YI++Lq PCP021634.1 130 RMSHTTVERNRRKQMNDHLTVLRSLMPCF---YVKRGDQASIIGGVVDYINELQ 180 99************************9...9******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MDMDDRDRSS DFLEEHEQYY HGDTDCNLGT LGDDLFSILE NLDDHGFGGG RGGGVVDVPQ 60 PSATAPLDYE QLLAVFSASP KDFSSSADQT ELDETNSAPK IKRLKLSSAA TPSTTATTTT 120 MNPSDQDGGR MSHTTVERNR RKQMNDHLTV LRSLMPCFYV KRGDQASIIG GVVDYINELQ 180 QVLQSLEAKK QRKAYSCEVL SSPRLQQVPS PRPPGPSPSV LSPRKPPLSP RLGGSSLPPI 240 SPRTPQSTSP YKPTAARTIL QQPQILPAAP NIFSNYLISS PTMVASSSLE PSPTSSSATT 300 TINNSIDNLN ELFANSKSAL ADVEVKFSGP NVLLKTVSPR IPGQALKIIS TLEDLSLEIL 360 HVSITTADET MLNSFTIKIG IECQLSAEEL VHQIQQTFC

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MDMDDRDRSS DFLEEHEQYY HGDTDCNLGT LGDDLFSILE NLDDHGFGGG RGGGVVDVPQ  60
PSATAPLDYE QLLAVFSASP KDFSSSADQT ELDETNSAPK IKRLKLSSAA TPSTTATTTT  120
MNPSDQDGGR MSHTTVERNR RKQMNDHLTV LRSLMPCFYV KRGDQASIIG GVVDYINELQ  180
QVLQSLEAKK QRKAYSCEVL SSPRLQQVPS PRPPGPSPSV LSPRKPPLSP RLGGSSLPPI  240
SPRTPQSTSP YKPTAARTIL QQPQILPAAP NIFSNYLISS PTMVASSSLE PSPTSSSATT  300
TINNSIDNLN ELFANSKSAL ADVEVKFSGP NVLLKTVSPR IPGQALKIIS TLEDLSLEIL  360
HVSITTADET MLNSFTIKIG IECQLSAEEL VHQIQQTFC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	130	141	RMSHTTVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53210.1	1e-93	bHLH family protein