PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP021779.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 336aa    MW: 35412.7 Da    PI: 6.2408
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP021779.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.33.8e-10185229554
                  HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  h+++Er RR+ri +++  L+el+P++      K + a++L + v+Y+k L
  PCP021779.1 185 HSIAERLRRERIAERMKALQELVPSC-----NKTDRAAMLDEIVDYVKFL 229
                  99***********************8.....6****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MAGNPPEGLG DDFFEQILAV PPSYSAGGGG GESAGGGYGG EVGSMPMALQ LGSAGSSGGG  60
AGYRGGGGVG MGLGMPLGLN LEQGGFLGQD NRFRDEVVEA NNTNNTNTSN VSASINERDS  120
VHMSSLFPAF GHLQNHSSLR PTPRPPQPPH QFHSQPPPGP ANAVHHSPAI RPRVRARRGQ  180
ATDPHSIAER LRRERIAERM KALQELVPSC NKTDRAAMLD EIVDYVKFLR LQVKVLSMSR  240
LGGAGAVAQL VADVPLSAVE GEGMEGGTNQ QAWEKWSNDG TEQQVAKLME EDVGAAMQFL  300
QSKALCIMPI SLAPAIFRTH QPDATTMVKP ESNSSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1190195RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.32e-69bHLH family protein