PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP021889.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ERF

Protein Properties

Length: 229aa MW: 25156.2 Da PI: 6.3982

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP021889.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	59.3	9.3e-19	95	144	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr+++ +g+++AeIrdp++ng +r++lg++ tae+A a+++a+ k++g PCP021889.1 95 FRGVRRRP-WGKYAAEIRDPKKNG--ARIWLGTYETAEDAGLAYDRAAFKMRG 144 89****.*******9998..***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MSTESISSSN WALLESIRQH LLHDDFETQE TFLADVAEFD APLLSSPSTP SSSNAHFLVE 60 GLDDTMGIMN HALDTSNNFE VAACVVQVPQ RGWNFRGVRR RPWGKYAAEI RDPKKNGARI 120 WLGTYETAED AGLAYDRAAF KMRGSKAKLN FPHLIGTHDS EPGRVASKRC SLEPSSSSVL 180 SSDGGGSPTL KRKRNVVCSV AKAKLEEGDE PFQVFQLESF SLGSHLLLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44840.1	4e-43	ERF family protein