PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP022131.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 270aa    MW: 30087.3 Da    PI: 6.4195
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP022131.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.19.6e-0933572348
                     -HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                     +W++Ia++++  Rt++++k++w+++l
      PCP022131.1 33 RWAAIASYLP-QRTDNDIKNYWNTHL 57
                     6*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MLGKKGRHFQ VVDGADGDSG AVMMSTARWV RMRWAAIASY LPQRTDNDIK NYWNTHLKKK  60
LKNFQSALDP HTTSDDPFNV NVSRMSLSEG SLDNMTSHAS SIVLRNNQSS STYASSTENI  120
SRLLEGWMRS SPTPRTSSLK HHAASGDDQG KPSGISTGNL ASNEEFESIL SNENLNNFAS  180
WDRSTCDSST YSNNKASQLS IKVPNNGEII HDRHLLRDED QKCKQILRCE SSSTNCNNPP  240
LTFLEKWLLD ESAGHVEDDQ MMELSPMSLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.27e-27MYB_related family protein