PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP022165.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 305aa    MW: 33319.2 Da    PI: 5.0967
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP022165.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.4e-20149199155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  ++++GVr+++ +grW+AeIrdp   ++rkr++lg+f+taeeAa  +++a+  l+g
  PCP022165.1 149 KKFRGVRRRP-WGRWAAEIRDP---NRRKRVWLGTFDTAEEAASVYDRAAILLKG 199
                  59********.**********8...335**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MLSPSILDVA ASDQTRISNF ISSASKSMKT FQPTSSAHSA VKFSEQITTV TKPMIQEPDN  60
PNPVPPKLVR IILTDADATD SSSDDEDSGV RRVKRHVRQI SLELSSPSSS SPSSSSSFSS  120
GQSKRVRKDP KPVKRTGSKS PAMDASRQKK FRGVRRRPWG RWAAEIRDPN RRKRVWLGTF  180
DTAEEAASVY DRAAILLKGP DAVTNFSNAV TTEEKVVADV VVPAAGEGCG CVSPPSSEAL  240
SSPTSVLRYE EQTPFDGFIY GDVDDFVFDI DLPLSFPDIM LSSNNFVRDE FGEFDVDDFL  300
ADVVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1155174RRRPWGRWAAEIRDPNRRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.19e-34ERF family protein