PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP022273.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 372aa MW: 41586.9 Da PI: 8.8492

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP022273.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174	4.4e-54	8	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..k 96 lppGfrFhPtdeel+ +yL kkv++++l++ +vi+evdiyk++Pw+Lp+k++ +ekewyfFs+rd+ky++g r+nra++sgyWkatg+dk++++ + PCP022273.1 8 LPPGFRFHPTDEELILHYLVKKVASTPLPV-SVIAEVDIYKFDPWELPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVAPsgG 104 79**************************.99***********988899***********************************99889 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 g++vg+kk Lvfy+gr pkg kt+W+mheyrl PCP022273.1 105 GQNVGVKKALVFYRGRPPKGIKTNWIMHEYRL 136 999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MKNPESRLPP GFRFHPTDEE LILHYLVKKV ASTPLPVSVI AEVDIYKFDP WELPAKAAFG 60 EKEWYFFSPR DRKYPNGARP NRAAASGYWK ATGTDKTIVA PSGGGQNVGV KKALVFYRGR 120 PPKGIKTNWI MHEYRLPENP NNHTTTNHHH RIMKLKDLSM RLDDWVLCRI YKKSNVGTSA 180 VALPSDQNQE VQEEEDFLHD ILSPSLKSPF TGLDHNMMST SNTSSLKPQK SCSFSNLLDA 240 MDYSLLTSIL ADGQYSIPTG TGFQSTTPNK FSYSCTGSSS IGLDPQLLFN TDISSSSHLL 300 QTLPQYNGLN LPSSASSTEN RLKRQHSITD DRGVLLCPSK KYVNSNCSFT NTANSFLNQQ 360 LLLSSPSFHF QE

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MKNPESRLPP GFRFHPTDEE LILHYLVKKV ASTPLPVSVI AEVDIYKFDP WELPAKAAFG  60
EKEWYFFSPR DRKYPNGARP NRAAASGYWK ATGTDKTIVA PSGGGQNVGV KKALVFYRGR  120
PPKGIKTNWI MHEYRLPENP NNHTTTNHHH RIMKLKDLSM RLDDWVLCRI YKKSNVGTSA  180
VALPSDQNQE VQEEEDFLHD ILSPSLKSPF TGLDHNMMST SNTSSLKPQK SCSFSNLLDA  240
MDYSLLTSIL ADGQYSIPTG TGFQSTTPNK FSYSCTGSSS IGLDPQLLFN TDISSSSHLL  300
QTLPQYNGLN LPSSASSTEN RLKRQHSITD DRGVLLCPSK KYVNSNCSFT NTANSFLNQQ  360
LLLSSPSFHF QE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.1	1e-102	NAC family protein