PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP022418.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 322aa    MW: 35620.1 Da    PI: 6.7144
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP022418.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.86.9e-12202247454
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  +h e+Er+RR+++N +f  Lr ++P+       +++Ka+ L  Av YI++L
  PCP022418.1 202 NHVEAERQRREKLNRRFYALRAVVPNV-----SRMDKASLLSDAVVYINEL 247
                  799***********************6.....4***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MDLDGGDVTD AEWFYFYTVS LTQSFTAGHG NSNILGRTFC SGGFVWLAGD HELQFYECER  60
VKKARMHGIQ TLVCIATSCG VLELASLDAI KVDWGLVQIS KSLFGSKNNN NMVSKQLSSS  120
REDHVLVPLL ESGMFSEAEQ RDWTTQGGTK EVPPVTIGGS SSDSGPSDSV GNFTSENMEN  180
IRLKKRGRSS NRETGRSETP INHVEAERQR REKLNRRFYA LRAVVPNVSR MDKASLLSDA  240
VVYINELKAR VEQLEAKIQA QHLKPVVDIG GQTTSSIIDH HQTRPRLSSS YDNKAAGVME  300
IDVKIVGSEA MIRVQCPDCV YP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1183189LKKRGRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.12e-41bHLH family protein