PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP022571.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family BBR-BPC
Protein Properties Length: 340aa    MW: 38129.1 Da    PI: 9.7598
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP022571.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind394.41.6e-12013401301
    GAGA_bind   1 mdddgsre..rnkg.yyepa..aslkenl..glqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensl 91 
                  mdd g+re  r+k+ +y+ a  + l +n+   +q+m+++ erda+i+ernla+sekkaa+aerdmaflqrd+a++ern a++erd+++++l++++nsl
  PCP022571.1   1 MDDGGHREngRHKAdQYKAAqgQWLMHNQpsMKQIMAIMGERDAAIQERNLAFSEKKAALAERDMAFLQRDAAITERNSAIMERDSAIATLQYRDNSL 98 
                  9*****999*****99*9554444444432146****************************************************************9 PP

    GAGA_bind  92 a....salpvgvqvlsgtksidslqqlse.....pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkk 180
                  +    s++p+g+q+++g+k+++++qq+++     p++++++++ r+++++++  +   a++ ++      ++++k+p+e+k+ +++kk++ks +kvk+
  PCP022571.1  99 NsgnvSSCPPGCQISRGVKHVHHTQQQQQhvhhmPHMNEPSYGSRDMHTSDSITMPPDASVPTK------SRQPKRPREPKTVQPNKKPSKSPRKVKR 190
                  999999*****************9994444888999**********998887775544443333......3456677777788888888888888888 PP

    GAGA_bind 181 esader.............................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstk 249
                  es+d +                             sk+++k++dl+ln+v++Dest+P+P+CsCtG lrqCYkWGnGGWqS+CCttt+S+yPLP++++
  PCP022571.1 191 ESEDLNkmtfdklhdwkggqdmgsggddlnkqvvvSKSDWKCQDLGLNQVAYDESTMPAPMCSCTGLLRQCYKWGNGGWQSSCCTTTMSMYPLPAVPN 288
                  887744478888999*********************************************************************************** PP

    GAGA_bind 250 rrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                  +r+aR++grKmS++af+klL++LaaeG+dlsnp+DLkdhWAkHGtn+++ti+
  PCP022571.1 289 KRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPIDLKDHWAKHGTNRYITIK 340
                  ***************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MDDGGHRENG RHKADQYKAA QGQWLMHNQP SMKQIMAIMG ERDAAIQERN LAFSEKKAAL  60
AERDMAFLQR DAAITERNSA IMERDSAIAT LQYRDNSLNS GNVSSCPPGC QISRGVKHVH  120
HTQQQQQHVH HMPHMNEPSY GSRDMHTSDS ITMPPDASVP TKSRQPKRPR EPKTVQPNKK  180
PSKSPRKVKR ESEDLNKMTF DKLHDWKGGQ DMGSGGDDLN KQVVVSKSDW KCQDLGLNQV  240
AYDESTMPAP MCSCTGLLRQ CYKWGNGGWQ SSCCTTTMSM YPLPAVPNKR HARVGGRKMS  300
GSAFNKLLSR LAAEGHDLSN PIDLKDHWAK HGTNRYITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-150BBR-BPC family protein