PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP022591.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

DBB

Protein Properties

Length: 302aa MW: 33173.3 Da PI: 7.3

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP022591.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.4	5e-07	4	45	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg.......Htv 39 C+ +++ ++ fC+ ++ lC+ C H+ H++ PCP022591.1 4 QCDVCNKDDASVFCTADEAALCDACDHRVHHAnklaskhHRF 45 7****99******************6445888886665 PP
2	zf-B_box	27.4	7.1e-09	56	93	4	39
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg..Htv 39 ++C+ ++e ++ lfC++++ lC++C l +H+ Ht+ PCP022591.1 56 PVCDICQERRAFLFCQQDRAILCRECDLPIHNAneHTL 93 79*****************************7689987 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MKIQCDVCNK DDASVFCTAD EAALCDACDH RVHHANKLAS KHHRFSLVHP SSKEFPVCDI 60 CQERRAFLFC QQDRAILCRE CDLPIHNANE HTLKHNRYLL TGIKLSATSV LYKSSPPRPT 120 VATASSETAA TDLKKHQPST KKSVSAASPA ISNPNPPPMS VKNSTSTAAI DKGGGNLVGA 180 TNTISEYLIE TLPGWHVEDF LDFSNAPFGF SKADNDMMLS FSEAYPESNL NSFSSENMGM 240 WVRQASQAPP YQYSHMGGGF VGFEETKQGK NMKASNRMWM DDGFTVPQIS PPSVGSKSFR 300 PF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	2e-84	DBB family protein