PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP022599.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 240aa    MW: 26190.4 Da    PI: 9.7376
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP022599.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-184594255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                  ykGVr++  +g+WvAeIr+p   + r +r +lg+f t +eAa a++aa++kl+g
  PCP022599.1 45 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFATSYEAALAYDAAARKLYG 94
                 69****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MSTSEMIGGS SSVGVAEKPA KRPAQGSSRK GCMKGKGGPE NAMCTYKGVR QRTWGKWVAE  60
IREPNRGARL WLGTFATSYE AALAYDAAAR KLYGSKAKLN LPDQQAPNHR HRQLNQHLQH  120
QVFPSSANPG VPPQIPNQTL VQNNPSVDRP RGNYNSGRAE TPQEQDGMKV EKNMSSGVNN  180
EGMDGIFWGN MSESFPVFDD SMWTEAAMSL DLPVVADQGI FGSSPWMGIA GKYYIRLNGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.19e-40ERF family protein