PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP022601.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 229aa    MW: 25056.8 Da    PI: 6.0753
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP022601.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP224.76e-0830553055
          AP2 30 rfslgkfgtaeeAakaaiaarkkleg 55
                 r +lg+++t +eAa a++aa++kl+g
  PCP022601.1 30 RLWLGTYDTSYEAALAYDAAARKLYG 55
                 78*********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MSKWEMGGGS SSVGVPEKKL AKRPPNRGPR LWLGTYDTSY EAALAYDAAA RKLYGSEAQL  60
NLPDQQAPKY HHHQLNQHLQ HQVFPSSANP RVPPQIPNQT LVQNNPSGTG TNPACYAASV  120
KDIAVPVIHN NFPNVQVDRP HGNYNSGGAE TLEQGGMKVE KNMSSGVNNE GMDGIFWGNM  180
SDNFPVFDDW IWTEEAMSLD LPVVADQGIF GRGFVDGNCW ETSHRPNGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.13e-11ERF family protein