PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP022616.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 455aa MW: 49487.3 Da PI: 7.2521

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP022616.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.5	6.5e-05	336	374	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++++ L++l+ + +K + a++L +A+ YIk Lq PCP022616.1 336 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 374 7788899*******998.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MESANFHHQQ HHQLQENLVG SSSLAATTPS CYAVGTKPAW TPTTTLSSSG NSLPNSSLDT 60 LNSSLVPELG FHWLTNITSD HQSAHDLVYI KEELSSSSSL DHHSSFPKLT EMLTVATSSS 120 SIDHDQYFQF IKNEQKDQMI MNDLSEKLLL KTLSSRCQMN STINSQHHQI PPSARDHHQF 180 YSNDHHHLLH NSNLMGVVPL AMPSRSAGHF SQIYPSINVS NLNRSLSSST LSSSSLDMNL 240 QAMDLLGASA RFSTGDSSSF STTPTNSHDT LGLYNERHNS FGTLEQMHQG KVSSFDNEMT 300 EVKRPGSLIE PKVTQAAAPK KSRLESRTSC PPFKVRKEKL GDRIAALQQL VAPFGKTDTA 360 SVLMEAIGYI KFLQNQVETL SVPYMKSSRN KTSKTILQGG MAEINGNGET KRDLISRGLC 420 LVPLSCMSYV TGDVSGGGGS GGGSLWPTPN FGGGT

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MESANFHHQQ HHQLQENLVG SSSLAATTPS CYAVGTKPAW TPTTTLSSSG NSLPNSSLDT  60
LNSSLVPELG FHWLTNITSD HQSAHDLVYI KEELSSSSSL DHHSSFPKLT EMLTVATSSS  120
SIDHDQYFQF IKNEQKDQMI MNDLSEKLLL KTLSSRCQMN STINSQHHQI PPSARDHHQF  180
YSNDHHHLLH NSNLMGVVPL AMPSRSAGHF SQIYPSINVS NLNRSLSSST LSSSSLDMNL  240
QAMDLLGASA RFSTGDSSSF STTPTNSHDT LGLYNERHNS FGTLEQMHQG KVSSFDNEMT  300
EVKRPGSLIE PKVTQAAAPK KSRLESRTSC PPFKVRKEKL GDRIAALQQL VAPFGKTDTA  360
SVLMEAIGYI KFLQNQVETL SVPYMKSSRN KTSKTILQGG MAEINGNGET KRDLISRGLC  420
LVPLSCMSYV TGDVSGGGGS GGGSLWPTPN FGGGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	2e-56	bHLH family protein