PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP022713.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 255aa    MW: 28897.9 Da    PI: 9.0633
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP022713.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.67.3e-51141381128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 
                  lppGfrFhPtdeelv +yL++k+ + +l++ ++i+evd++k++PwdLp      e+e yfFs+r+ ky++g+r+nrat sgyWkatg dk++++  +g
  PCP022713.1  14 LPPGFRFHPTDEELVLQYLRRKAYSCPLPA-SIIPEVDVCKADPWDLPGD---CEQERYFFSTREAKYPNGNRSNRATCSGYWKATGLDKQIVTCrGG 107
                  79****************************.89***************44...46799*********************************9876589 PP

          NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                  ++vg+kktLvfy+g+ p+g++tdW+mheyrl
  PCP022713.1 108 QVVGMKKTLVFYRGKPPHGTRTDWIMHEYRL 138
                  99***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MERISFVKNG VLRLPPGFRF HPTDEELVLQ YLRRKAYSCP LPASIIPEVD VCKADPWDLP  60
GDCEQERYFF STREAKYPNG NRSNRATCSG YWKATGLDKQ IVTCRGGQVV GMKKTLVFYR  120
GKPPHGTRTD WIMHEYRLVL PETPASIAPP EKNSTHSPVV PMDNWVLCRI FLKKRGGKNE  180
EEQVQQPSFN VRKPKNLRPV FYDFMTKDRE NLSLAPCSSS SGSSGITDVV SSEQVDNDHG  240
ESSSCNSLGL IRRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.16e-99NAC family protein