PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP022727.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 158aa    MW: 17749.4 Da    PI: 10.3388
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP022727.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.67.3e-114997355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                  +h+ +Er RR++i  ++  L++l+P +    ++   Ka+iL + ++Y++ Lq
  PCP022727.1 49 NSHSLAERARREKISMSMKLLQSLVPGC----DQITGKAQILDEIIKYVQLLQ 97
                 58*************************9....9*****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MVSQEEEKLT KQMNKNRANK QSKVAAADKA VQFQRDGVRV KARRGQATNS HSLAERARRE  60
KISMSMKLLQ SLVPGCDQIT GKAQILDEII KYVQLLQNQV ECLAAQLASV DLMLNFCELN  120
QSANPSASES LALPSSGLWQ TLHRLPLPYY LQRNRKPT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.15e-33bHLH family protein