PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP022832.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WOX

Protein Properties

Length: 175aa MW: 20111.7 Da PI: 8.8271

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP022832.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.2	8.7e-21	26	87	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L +lF++ r+ps++++++++++l +++ ++V++WFqN++a+e++ PCP022832.1 26 KCGRWNPTAEQVKVLTDLFRSgLRTPSTDQIQKISSQLsfygKIESKNVFYWFQNHKARERQ 87 568***************99************************************97 PP
2	Wus_type_Homeobox	114.2	6.4e-37	26	89	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L++l++sGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ PCP022832.1 26 KCGRWNPTAEQVKVLTDLFRSGLRTPSTDQIQKISSQLSFYGKIESKNVFYWFQNHKARERQKR 89 678***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MDEGMSGFCI KASSFRDGGN GNSGTKCGRW NPTAEQVKVL TDLFRSGLRT PSTDQIQKIS 60 SQLSFYGKIE SKNVFYWFQN HKARERQKRR KVSIDEKDII RRDQENMSPK QINQVSEPAR 120 VIETLQLFPI NSFNESEGEK LRFHANEYCK EASAFTYTVG TEMDLPPLDL RLSFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	8e-67	WOX family protein