PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP022904.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 516aa MW: 57753.3 Da PI: 6.8785

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP022904.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.4	1.9e-11	318	364	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr+++P+ K++ ++ L Av YI++L+ PCP022904.1 318 NHVEAERQRREKLNHRFYVLRSVVPNV-----SKMDRSSLLADAVAYINQLK 364 799*********************6.....5***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence
MEEIMSSCTP PNFCRETSSK FQQSLQFIIQ NRPEWWVYSI FWQASKDSIS DQVSLSWAAG 60 HFQDTRDHLE SKRSNRVTNS YQPKFGFNNV GRKKTINREV EALLHDDMVD LDMRLVDQGD 120 VADTEWFYSY TVSLTQSFSA SHGNNSGNIL GRAFGSGGFV WLAADHEFQF YDCERVKEAR 180 MNGIQTLVCI ATPCGVLELA SLDVIKEDWG LVQLSKSLFG SDGNINKTLS KQTSHDGNVI 240 APILENGLFS AAEKELTRQD RGGINEAAPI NLGRSSPESP SDSVDNFTSE NTESMTRTKK 300 RGRSSNHGSA SRESQLLNHV EAERQRREKL NHRFYVLRSV VPNVSKMDRS SLLADAVAYI 360 NQLKSKVEEL EAKVQEQPQK PKACNNASNS LDHHSGQSTS SKVERRHCSN NNDSNIISSN 420 NNNNNNNINS DRGAAADVEV DVKIMGSEAI IHVQCPDQGY PYAKLMKALK GLGLQVYHAS 480 ISSVKELMIQ DVVARLPYGF NGEEALRNGI IKRWYR

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence

MEEIMSSCTP PNFCRETSSK FQQSLQFIIQ NRPEWWVYSI FWQASKDSIS DQVSLSWAAG  60
HFQDTRDHLE SKRSNRVTNS YQPKFGFNNV GRKKTINREV EALLHDDMVD LDMRLVDQGD  120
VADTEWFYSY TVSLTQSFSA SHGNNSGNIL GRAFGSGGFV WLAADHEFQF YDCERVKEAR  180
MNGIQTLVCI ATPCGVLELA SLDVIKEDWG LVQLSKSLFG SDGNINKTLS KQTSHDGNVI  240
APILENGLFS AAEKELTRQD RGGINEAAPI NLGRSSPESP SDSVDNFTSE NTESMTRTKK  300
RGRSSNHGSA SRESQLLNHV EAERQRREKL NHRFYVLRSV VPNVSKMDRS SLLADAVAYI  360
NQLKSKVEEL EAKVQEQPQK PKACNNASNS LDHHSGQSTS SKVERRHCSN NNDSNIISSN  420
NNNNNNNINS DRGAAADVEV DVKIMGSEAI IHVQCPDQGY PYAKLMKALK GLGLQVYHAS  480
ISSVKELMIQ DVVARLPYGF NGEEALRNGI IKRWYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	5e-50	bHLH family protein