PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP023067.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 577aa MW: 64958.5 Da PI: 4.2664

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP023067.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.9	1.2e-50	18	144	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 +pGfrFhPtdeelv +yLk+k+ +k+l++ +vi+e+d+yk++P +Lp+ +k+++++w+fFs+rd ky++g r++rat++gyWkatgkd+++++ + PCP023067.1 18 APGFRFHPTDEELVLYYLKRKICKKRLKI-DVIAETDVYKWDPDELPElsLLKTGDRQWFFFSPRDWKYPNGGRSSRATRHGYWKATGKDRTIVC-YS 113 69*************************.99**********9445788899***********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + vglkktLv+ykgrap+ge+tdWvmhey+l PCP023067.1 114 RSVGLKKTLVYYKGRAPSGERTDWVMHEYTL 144 99*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MVTEDDSAAL FCDGHFAAPG FRFHPTDEEL VLYYLKRKIC KKRLKIDVIA ETDVYKWDPD 60 ELPELSLLKT GDRQWFFFSP RDWKYPNGGR SSRATRHGYW KATGKDRTIV CYSRSVGLKK 120 TLVYYKGRAP SGERTDWVMH EYTLDEEELK RCQNVQQYYA LYKVYKKSGP GPKNGEQYGA 180 PFREEDWVDD ESPVIKTAAD SQISVKQAVD VVSIDNVKVN GDVHYALNDI EEFMKQIADE 240 AVLPEMNGYG YTAPQVLSEE DTQSTLVDLY SREVICAEPV REFNPNVQQC NVDANFDFTQ 300 SSTSQMQSYE ASEVTTAAPD IYDQDPPALH EEDFLEIDDL LGPEPTVPNT VNPVDDLQFG 360 ELDGLSEFDL YHDAAMFLQD LGPIDEGNVA HHQYMNSQGN NIADQFEYHL QPNPVAENQV 420 NHLLNPESTQ INNQLWTNTE RAEPNQGSLS YSTPGVVYES SNFPSQATQN QSGNEAAGAT 480 SQFSSALWAF VESIPTTPAS ASESALVNRA FERMSSFSRL RINTASTTVA AGTRKRRFAA 540 NVAASDDEED IAKFIGVVMD FDSINPTGFM EDNFYRE

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MVTEDDSAAL FCDGHFAAPG FRFHPTDEEL VLYYLKRKIC KKRLKIDVIA ETDVYKWDPD  60
ELPELSLLKT GDRQWFFFSP RDWKYPNGGR SSRATRHGYW KATGKDRTIV CYSRSVGLKK  120
TLVYYKGRAP SGERTDWVMH EYTLDEEELK RCQNVQQYYA LYKVYKKSGP GPKNGEQYGA  180
PFREEDWVDD ESPVIKTAAD SQISVKQAVD VVSIDNVKVN GDVHYALNDI EEFMKQIADE  240
AVLPEMNGYG YTAPQVLSEE DTQSTLVDLY SREVICAEPV REFNPNVQQC NVDANFDFTQ  300
SSTSQMQSYE ASEVTTAAPD IYDQDPPALH EEDFLEIDDL LGPEPTVPNT VNPVDDLQFG  360
ELDGLSEFDL YHDAAMFLQD LGPIDEGNVA HHQYMNSQGN NIADQFEYHL QPNPVAENQV  420
NHLLNPESTQ INNQLWTNTE RAEPNQGSLS YSTPGVVYES SNFPSQATQN QSGNEAAGAT  480
SQFSSALWAF VESIPTTPAS ASESALVNRA FERMSSFSRL RINTASTTVA AGTRKRRFAA  540
NVAASDDEED IAKFIGVVMD FDSINPTGFM EDNFYRE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	36	45	KRKICKKRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-144	NAC family protein