PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP023091.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 351aa MW: 39771.2 Da PI: 4.7927

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP023091.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.6	4e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 lppGfrFhPtdeelv +yL +k++g+++el e+i+evd+yk+ePwdLp k + +++ ewyf+s+rd+ky++g+r+nrat++gyWkatgkd++v s + PCP023091.1 6 LPPGFRFHPTDEELVAYYLDRKINGRTIEL-EIIPEVDLYKCEPWDLPdKsFLPSKDMEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKDRAVSS-Q 101 79**************************.99**********96435566888*********************************9.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 +++vg+kktLv+y+grap+g +t+Wvmheyrl PCP023091.1 102 SRAVGMKKTLVYYRGRAPHGIRTNWVMHEYRL 133 99**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MAPMSLPPGF RFHPTDEELV AYYLDRKING RTIELEIIPE VDLYKCEPWD LPDKSFLPSK 60 DMEWYFYSPR DRKYPNGSRT NRATRAGYWK ATGKDRAVSS QSRAVGMKKT LVYYRGRAPH 120 GIRTNWVMHE YRLVDSVCAN ASSSLKDSYA LCRVFKKTIQ MPKNNKEEKP VGINNADKDS 180 IWVSNEQLFG KENSGINEGA SRGIETDQDG NYSNHDYPKF PSDTSSSDLT QGTPTENGIA 240 DDLQAPFASD EANSSADLYS FGVHCSSDLI QETYIPHNTS VLNSYQFPYP PLQLEDFPQI 300 NLAAETKTAK PEIIDEYMLY DKFKGDMNGT FEEIFSLCSS QDNSVAFSMQ D

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MAPMSLPPGF RFHPTDEELV AYYLDRKING RTIELEIIPE VDLYKCEPWD LPDKSFLPSK  60
DMEWYFYSPR DRKYPNGSRT NRATRAGYWK ATGKDRAVSS QSRAVGMKKT LVYYRGRAPH  120
GIRTNWVMHE YRLVDSVCAN ASSSLKDSYA LCRVFKKTIQ MPKNNKEEKP VGINNADKDS  180
IWVSNEQLFG KENSGINEGA SRGIETDQDG NYSNHDYPKF PSDTSSSDLT QGTPTENGIA  240
DDLQAPFASD EANSSADLYS FGVHCSSDLI QETYIPHNTS VLNSYQFPYP PLQLEDFPQI  300
NLAAETKTAK PEIIDEYMLY DKFKGDMNGT FEEIFSLCSS QDNSVAFSMQ D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G54330.1	1e-110	NAC family protein