PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP023122.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 1009aa MW: 110536 Da PI: 6.9402

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP023122.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.3	1.6e-09	179	223	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P++ K + a++L + v+Y+k L PCP023122.1 179 HSIAERLRRERIAERMKALQELVPSC-----NKTDRAAMLDEIVDYVKFL 223 99*********************8.....6**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1009 aa Download sequence
MAGNPQEGLG DDFFEQILAV PPSYSAGGGG ESAGGGYGGD VGSMPMVLQL GSAGSSGGGA 60 GYRGGVGMGL GMPLGLNLEQ GGFLGRDSRF RDEANNTNNT NSSNVSASIN ERESVHMSSL 120 FPAFGHLQNH SSLRPTPPPP QPPHQFHSQP PPGPSNAVHH PPSIRPRVRA RRGQATDPHS 180 IAERLRRERI AERMKALQEL VPSCNKTDRA AMLDEIVDYV KFLRLQVKVL SMSRLGGAGA 240 VAQLVADVPL SAVEGEGMEG GTNQQACEKW SNDGTEQEVA KLMEEDVGAA MQFLQSKALC 300 IMPISLAPAI FRTHQPDAPT MQCGRGIRCL SSSSSMGRRI HWDPTVALEL NHPALVLLEK 360 CSTRHHFKQI LGQMMRTCLL GQTFPMSRLL TFSAISHPEN LDMAIRLFDH FTPNPNLYIY 420 NSMISALSFS KSQAFALYSS MLKAGICPDK HTLLYLLQAS ECVVEAKQIH SHAVVTGLLS 480 HRYLQNTLMK IYLEKGEMGL AQQLFDDVPM PDTVPFNIMI VGYAKMGYFS EALQVFHEMV 540 GLGLEPDEFT ILGLLISCGL LGDARLGMSV HAWIERRKAI TSGNLILGNA LLDMYVKWNK 600 LEVAQSLFDA LTEKDIVSWN TMAAGYAKVG KIELAQNYFE QMPRRDLVSW NSLIAGYAKK 660 GDYTMAVKVF NEMITENAKP DSNTLVNLVS AAAETGALDH GRSMHGLIVR MQLKIDVFLG 720 SALIDMYCKA GSIERAFMVF RGLTEKDVTV WTTMISGFAF HGYGRKALDL FSEMQRGLPP 780 NGVTLLAVLT ACSHSGLVDE GLNLFNNMDK KFGIEPGVEH YGCLVDLLCR SGRLAEAKEV 840 MKKMPVKPSR NIWGAMLSAC RAQGDMELAE TASAELLKLE PGREGGYIMM SNIYAACGKW 900 SYSDKIREVM EVRGVKKTAG CSSVNVDGVV HNFVAADKRH PRWEEIFLVL QCMKSEMKLA 960 AGFQFRSICI ILENWLNCSG IESTLLSFVW SAFKIAESII SESVFWTDL

Sequence ? help Back to Top

Protein Sequence Length: 1009 aa Download sequence

MAGNPQEGLG DDFFEQILAV PPSYSAGGGG ESAGGGYGGD VGSMPMVLQL GSAGSSGGGA  60
GYRGGVGMGL GMPLGLNLEQ GGFLGRDSRF RDEANNTNNT NSSNVSASIN ERESVHMSSL  120
FPAFGHLQNH SSLRPTPPPP QPPHQFHSQP PPGPSNAVHH PPSIRPRVRA RRGQATDPHS  180
IAERLRRERI AERMKALQEL VPSCNKTDRA AMLDEIVDYV KFLRLQVKVL SMSRLGGAGA  240
VAQLVADVPL SAVEGEGMEG GTNQQACEKW SNDGTEQEVA KLMEEDVGAA MQFLQSKALC  300
IMPISLAPAI FRTHQPDAPT MQCGRGIRCL SSSSSMGRRI HWDPTVALEL NHPALVLLEK  360
CSTRHHFKQI LGQMMRTCLL GQTFPMSRLL TFSAISHPEN LDMAIRLFDH FTPNPNLYIY  420
NSMISALSFS KSQAFALYSS MLKAGICPDK HTLLYLLQAS ECVVEAKQIH SHAVVTGLLS  480
HRYLQNTLMK IYLEKGEMGL AQQLFDDVPM PDTVPFNIMI VGYAKMGYFS EALQVFHEMV  540
GLGLEPDEFT ILGLLISCGL LGDARLGMSV HAWIERRKAI TSGNLILGNA LLDMYVKWNK  600
LEVAQSLFDA LTEKDIVSWN TMAAGYAKVG KIELAQNYFE QMPRRDLVSW NSLIAGYAKK  660
GDYTMAVKVF NEMITENAKP DSNTLVNLVS AAAETGALDH GRSMHGLIVR MQLKIDVFLG  720
SALIDMYCKA GSIERAFMVF RGLTEKDVTV WTTMISGFAF HGYGRKALDL FSEMQRGLPP  780
NGVTLLAVLT ACSHSGLVDE GLNLFNNMDK KFGIEPGVEH YGCLVDLLCR SGRLAEAKEV  840
MKKMPVKPSR NIWGAMLSAC RAQGDMELAE TASAELLKLE PGREGGYIMM SNIYAACGKW  900
SYSDKIREVM EVRGVKKTAG CSSVNVDGVV HNFVAADKRH PRWEEIFLVL QCMKSEMKLA  960
AGFQFRSICI ILENWLNCSG IESTLLSFVW SAFKIAESII SESVFWTDL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	184	189	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02590.3	2e-59	bHLH family protein