PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP023276.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 333aa    MW: 36632.3 Da    PI: 5.8827
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP023276.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.14.9e-164594255
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 r +h+  E+rRR++iN++f+ Lr+l+P++    ++K + a+ L +++eY+++Lq
  PCP023276.1 45 RSKHSVTEQRRRSKINERFQILRDLIPHS----DQKRDTASFLLEVIEYVQYLQ 94
                 899*************************9....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MRTTAKGNQE EDEYDDEEFG SRKEGPSSNS NSKDAKNNDK ASVIRSKHSV TEQRRRSKIN  60
ERFQILRDLI PHSDQKRDTA SFLLEVIEYV QYLQEKVQKY EGSYQGWSPE PTKLMPWRNS  120
HWRVQSFVGN PQAIKSDAAP VSPFPGKFDD NNISINPNML PNSTPNPVES DPSRDVASKI  180
VDRQPEIVNK GIPLPMPLPM TPPVRSDGVL AHPLQGQISD AQSTQCPTTS ASDVLSQQEE  240
LTIEGGTISI SSVYSQGLLN SLSQALQSAG VDLSQASISV QIDLGNRANR GLSSGTPASK  300
DNDNPHSSNQ TMAHFRDAGS GEDSDHAHKR LKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.17e-99bHLH family protein