PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP023377.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 379aa    MW: 41490.4 Da    PI: 6.6943
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP023377.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.83.5e-151364155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  PCP023377.1 13 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 64
                 57****************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MIEKSSGFSR GASIYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE AAEAYDIAAI  60
KFRGLNAVTN FDMTRYDVKS ILESSTLPIG GAAKRLKDVE QAHHQHLHEM TLLADGHNRS  120
TTDDQREKLM MMNTSTSNSL DQYHQQLING DHHGMRINNV YGTGVGWPTL AFNQAATAVA  180
HQAAVPPFGM HYYSSVPYNS NGGQRVWCKQ EQDTNSQSFY QPQDHHHQLL QLGSTHNFFQ  240
PVNLMGNSST DSMEHSSGSN SVVYNGTTAG DHGGYIIPMG TAIANDHENN SNAFGNGSSD  300
HDQVKPALGY ENVFGSSSTT TTADAYNHAK SLYYLPVQAP QSSSVSSIGV SMKGSSEYDN  360
WVPTAVPTST HNMAPFSLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20840.15e-51AP2 family protein