PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP023413.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 330aa    MW: 35399.6 Da    PI: 8.9047
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP023413.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding452.6e-1496140347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
      PCP023413.1  96 AWTEEEHKLFLVGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 140
                      7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MSRTCSQCGN NGHNSRTCTD ASGEVGGGAT ASAENGIMLF GVRVTEANEF RKSASMNNLS  60
QYEQPLQADS NADAGYASDD VVHASGHGRE RKRGVAWTEE EHKLFLVGLQ KVGKGDWRGI  120
SRNFVKTRTP TQVASHAQKY FLRRNNHNRR RRRSSLFDIT TDTPLNSLME EDLGESSPTV  180
VPVLPFPIPP QPESNLGCNI LGGFPASTYP VAPSPAALPG ESSPTESKLT SLGLNMKSLD  240
DMQLSPTKVA QTTTKLIRPI PLHPPVVPPS SKMAGLNLNK KYSSSPTRDP LPLSLKLSTT  300
PSEEQSPTTP SHSSAFQAMS SGSDSVISVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.25e-76MYB_related family protein