PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP023577.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 321aa    MW: 35357.8 Da    PI: 9.9957
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP023577.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.94.7e-13132176347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r   ++Rt+ q+ s+ qky
      PCP023577.1 132 PWTEEEHRTFLIGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKY 176
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MGRKCSHCGN IGHNSRTCAN FRGTTSSTSF VGFRLFGVQL HRDHHHHIMM SSSNMNNNSA  60
NHHVSMSMKK SFSMECLPTT TSSASSSSPS NSSLSPSRLS MDENICASDK ASIGYLSDGL  120
ICQAQERKKG VPWTEEEHRT FLIGLEKLGK GDWRGISRNY VTTRTPTQVA SHAQKYFLRQ  180
ASLTKKKRRS SLFDMFGSSN NINMETDDPI PTQCDNIIRN NMAIDSSTVP LLEHSIAAKN  240
LNLDHSQKPQ RRSTTTQQRP VWIYGLIDFQ MKPNSSSSKA SVVPDLELTL AAPTSPNLEQ  300
KNKSSPTPAG PLLNLGAISV T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1185189KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.13e-53MYB_related family protein