PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP023651.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 245aa    MW: 26795.8 Da    PI: 4.8552
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP023651.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.6e-1964114155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  PCP023651.1  64 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 114
                  68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MSADQPQSSE TESSSNSSTS ASPPSSPSSL QTQNPQKPSS PIHQGIDTPC KKNAKRVRDS  60
SKHPVYRGVR MRNWGKWVSE IREPRKKSRI WLGTFPTPEM AARAHDVAAL SIKGNSAILN  120
FPELSDLLPR PVSNAPRDVQ AAASKAAEMH QFDSIPSMSP SPSSLSSLVS AIDNLSSESD  180
ELSEIVELPS LSCESTELRS EFVFVDSEDQ WVYPPAWLPR VGEFECSELG AASSVGFECL  240
LWDYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.15e-59ERF family protein