PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP023777.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 313aa    MW: 35583.5 Da    PI: 4.6677
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP023777.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.61.9e-07188230754
                  HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  ++ r RR++i ++ +eL +l+P a     +K++ ae+L+ A +Y+k L
  PCP023777.1 188 IAARERRRKIIEKTQELGRLIPGA-----TKMNTAEMLQAAYKYVKFL 230
                  56799******************9.....9****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MAMSTATFCP IDDWGSLQLL NPPEMNMLSL PTQQKLQAAS SGIFDLQDYY YSLANSTNPE  60
YTCIDPFFQP YKSSSENFLL PDFCSPTDNI NLALLSPETC PTLDEYDFSY QPYPKCQKLF  120
HDQQVQYCNS NFVVAATPNY FNAYDPFLQS EILVPTQTHE VQIQNQPEAA KLDNKVVSGT  180
GTVSPQSIAA RERRRKIIEK TQELGRLIPG ATKMNTAEML QAAYKYVKFL RAQVSVLKLM  240
TDSPIQQERK EERLYINQER LQVAASPIIQ EKLYSEEKCL VLKEFVEVLA KDDDIQSKPL  300
LKDKVAQLLQ TNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.19e-23bHLH family protein