PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP024083.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family FAR1
Protein Properties Length: 171aa    MW: 18895.8 Da    PI: 4.2416
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP024083.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1241.3e-07102163267
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklk 67 
                  +Y+e +++ GF v k++s+k  ++g+    t++C ++g++++++++     ++ ++ + +Cka+l+
  PCP024083.1 102 YYKECGRQSGFPVIKRSSTKG-DDGKLRYITMCCARSGTSKSTSSN---PLKPYPSIKNDCKAQLR 163
                  8*************9999987.8999***************99888...89999*********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MFYVFGTGSS SIEFTKEDDV VEVSSCSEIE SDGVHTIETS NEIIEEDDVI EATFDATEEE  60
SNGVHAVENN GTNMENTRNV EEKVQEPQVG MIFDNMDQVA TYYKECGRQS GFPVIKRSST  120
KGDDGKLRYI TMCCARSGTS KSTSSNPLKP YPSIKNDCKA QLRAGLYLGE K