PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP024145.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 276aa    MW: 30921.4 Da    PI: 10.427
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP024145.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH231.5e-07187227954
                  HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   r RR+ri +++  L++l+P        K++ a++L +A++Y+k L
  PCP024145.1 187 ARHRRERISEKIRILQRLVPGG-----IKMDTASMLDEAIHYVKFL 227
                  699*****************96.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MDVDMLKSLS SSSAVGGHHH HHHMDMMTMM MQIQKQHHSP DHFCNDSYPN NNNPTFPEID  60
FNWVSNPNPN NLESISPLPM FHNTNPNAVP QQPTLLNPAL PSSVSFMVNP IQEPLTPRLI  120
KPSGISPTGL SVPPSTSPYE KRNSMAAMRE MIFRIAAMQP IQIDPEAVKP PKRRNVKISK  180
DPQSVAARHR RERISEKIRI LQRLVPGGIK MDTASMLDEA IHYVKFLKKQ VQTLERAGAD  240
RPDGVGFQGS GNQLGNVNYS SFRRSSQLVG SKQILR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.16e-47bHLH family protein