PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP024294.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 198aa    MW: 22240.8 Da    PI: 6.8428
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP024294.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.4e-104787954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                  r RR+ri ++f  L++l+P       +Kl+ +++Le+A++Y+k L
  PCP024294.1 47 ARERRHRISDRFKILQSLVPGG-----TKLDTVSMLEEAIHYVKFL 87
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MDYLTATDSN SNNFASSSSS VTKNNRGGGK NKSNGVRLST DPQSVAARER RHRISDRFKI  60
LQSLVPGGTK LDTVSMLEEA IHYVKFLKTQ IWLHQTMINF ADDYHDPLSS LSPPSMLMDI  120
PAHDHDLHPI GFLDHDLCPT GCFDHLSHQL HQQTHDVYAH SDFVSAAASV QPPSPPAVNI  180
PIMPEYNCFQ RSRNNWQY