PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP024386.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 251aa    MW: 28796 Da    PI: 9.2855
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP024386.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.93.2e-10351155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 s+ykGV   + +grW A+I++      + r+ lg+f  +eeAak ++ a +k++g
  PCP024386.1  3 SRYKGVVLQS-NGRWGAQIYEK-----SHRVGLGTFKDEEEAAKTCDIASLKFRG 51
                 79****9887.8*********4.....6**********************99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MPSRYKGVVL QSNGRWGAQI YEKSHRVGLG TFKDEEEAAK TCDIASLKFR GLDAITNNSR  60
NKMKPYERDV IEALFLESHS KAEIVDMLRK HSYANELEIY KYKLYNGGAV GLDDGGKHYL  120
DLRDTCSSWR ELLFEKVATP SDVGRLNRMV IPKQHAEKHF QVHLCVGFGK GVLLKFEDEE  180
KKLKVGDVVR FERAVGEDKK MFIYCRPRNL DISGIREMHG RVGDPLRTVQ DHGEVRLFGV  240
NISRKPVHCR E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25560.11e-55RAV family protein