PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP024387.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 266aa    MW: 30583.1 Da    PI: 9.6709
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP024387.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP225.63e-081663255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 +yk V   + +g W A+I++      + r+ lg+f  +eeAak ++ a +k++g
  PCP024387.1 16 RYKRVVLQS-NGGWGAQIYEK-----SHRVGLGTFNDEEEAAKTYDIASLKFRG 63
                 677776655.8*********4.....6**********************99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MEQMVQVQTS CMPSSRYKRV VLQSNGGWGA QIYEKSHRVG LGTFNDEEEA AKTYDIASLK  60
FRGLDAITNN SRNKMKPYER DVTEALFLES HSKAEIVDML RKHSYANELE IYKYKLYNGG  120
AVGLDDGGKR MKHYLDLRET CSRGRELLFE KVETPSAVGR LNRMVIPKQH AEKHFQVHLN  180
IGFGKGVLLK FEDEEKKLKV GDVVRFERSV GEDKKMFIYC RLRNLDMSGI REMHGRVGDP  240
LRTVQDHGAV RLFGVNISRK PVHCRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25560.13e-59RAV family protein