PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP024490.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NF-YB

Protein Properties

Length: 250aa MW: 27135.3 Da PI: 6.5145

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP024490.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	153.1	5.1e-48	57	151	2	96
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 r qd+++Pianv+rim++vlP +aki+++aketvqecvse+i+f+t+ea++++qre+rkt++++d++wa+++lGfe+yv+pl+v+l++yre e+ PCP024490.1 57 RVQDQHMPIANVVRIMRRVLPPHAKITEAAKETVQECVSEYIAFITAEANQRSQREQRKTVSAEDIIWAMSKLGFENYVDPLNVFLHRYRESENS 151 679****************************************************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MERMGGGLPR RHANSPNAAN SNNSGDGHAV GNTSNPANAT GSTGNNTAQS THRPVVRVQD 60 QHMPIANVVR IMRRVLPPHA KITEAAKETV QECVSEYIAF ITAEANQRSQ REQRKTVSAE 120 DIIWAMSKLG FENYVDPLNV FLHRYRESEN SDRSQFMKRE HPLMDYGPAV PSGPAGPQVA 180 MMPPPLLPHF VPEFPLGFEQ RGPPMLDPSM IEIFLDGGSS TGAAEGGSSS SFGAQDQNWL 240 GGFDPSAQSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21970.1	1e-52	NF-YB family protein