PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP024552.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 254aa MW: 28925.2 Da PI: 5.5007

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP024552.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	146.5	1.4e-45	4	135	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppG+rF Pt+eel+++yL++k+egk++++ +vi+ +d+y+ ePwdLpk +++++++w+fF++r++++a+g r+nr+t+sgyWkatg+ v+s PCP024552.1 4 LPPGYRFYPTEEELISFYLHNKLEGKQVDTRRVIPVIDVYSKEPWDLPKfsgeLCNGDREQWFFFTPRQQREAQGGRPNRTTASGYWKATGSPGYVYS 101 79**************************99************656754445677********************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++++g+kkt+vfyk +ap+g+kt+W m+ yr+ PCP024552.1 102 SDNKVIGVKKTMVFYKDKAPTGRKTKWKMNVYRA 135 ****************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MEELPPGYRF YPTEEELISF YLHNKLEGKQ VDTRRVIPVI DVYSKEPWDL PKFSGELCNG 60 DREQWFFFTP RQQREAQGGR PNRTTASGYW KATGSPGYVY SSDNKVIGVK KTMVFYKDKA 120 PTGRKTKWKM NVYRAIEVDN LTNTSASAST STPKLRDEFS LCRVYVVSGS ARAFDRRPLE 180 PVVAQQKFSN STEASTSSLK TTMVDKASSS DETYSHSGEL GDLLETSAGI NSSNWEINEG 240 FEEPLWEWEQ LNFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	5e-89	NAC family protein