PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP024580.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

AP2

Protein Properties

Length: 298aa MW: 33638.3 Da PI: 6.1863

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP024580.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	27.5	7.7e-09	34	87	8	55
AP2 8 wdkkrgrWvAeIrd.pseng...kr..krfslgkfgtaeeAakaaiaarkkleg 55 +++++gr++A+++d s+n k+ + +lg ++ +e Aa+a++ a++k++g PCP024580.1 34 RHRWTGRFEAHLWDkLSWNVtqkKKgkQALYLGAYDKEESAARAYDLAALKYWG 87 6999********888844555335899*********************98 PP
2	AP2	41	4.7e-13	119	164	7	55
AP2 7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 r+++ +grW+A+I ++en k+ +lg++ t eeAa+a++ a+ + +g PCP024580.1 119 RRHHHNGRWEARIGRVVEN---KYLYLGTYSTQEEAARAYDIAAIEHRG 164 89999******997664...********************99886 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MKRTLGGATC VQKTLRLRLP GVSTEGEETR LQLRHRWTGR FEAHLWDKLS WNVTQKKKGK 60 QALYLGAYDK EESAARAYDL AALKYWGAST FTNFPISDYE KEIEIMQSVT KEEFLASLRR 120 HHHNGRWEAR IGRVVENKYL YLGTYSTQEE AARAYDIAAI EHRGINAVTS FDLSSYIKWL 180 KPKAGDTVAT QEPESVTEPE NMPFMTSGYI PADETSFSHT DPFASDYLNS PRKQEVTRSS 240 TNLNAGSKSS SPTALGLLLQ SSIFRELVQK NSNFSEDDST DGEEPKNQPQ VGSDDEYG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	6e-68	AP2 family protein