PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP024648.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 182aa    MW: 20047.1 Da    PI: 10.4292
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP024648.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP268.41.4e-214696155
          AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++++GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa+a+++a+++l+g
  PCP024648.1 46 PHFRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAARAYDEAALSLRG 96
                 689*******.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MSTVDALHLR DTALSLAVEP PSPPPGIPRP QPKHAAPVQA GAGKDPHFRG VRKRPWGRFA  60
AEIRDPWKKT RKWLGTFDTA EEAARAYDEA ALSLRGPKAK TNFGNLALVP PHSLLLGGGS  120
EMFWPPPPMY FMSGAPAVAP IRSEYRGYKL ENVDAVGGQE EKKMRKDKKP FLFDLNLPAP  180
LF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53170.11e-22ERF family protein