PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP024839.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 243aa MW: 27847.4 Da PI: 7.8211

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP024839.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.4	6.3e-35	23	114	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+y ++ed++++++isw+++g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv +++ weF +++F+kg+k++l++i+ PCP024839.1 23 FLLKTYMLVEDPATDDVISWNDDGSAFVVWQTAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATNR---------WEFCNDKFRKGEKDQLCDIR 110 9**************************************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k PCP024839.1 111 RRKA 114 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MEGVCDDQKR LLEYVRKSSP PPFLLKTYML VEDPATDDVI SWNDDGSAFV VWQTAEFARD 60 LLPTLFKHSN FSSFVRQLNT YGFRKVATNR WEFCNDKFRK GEKDQLCDIR RRKAWATKQQ 120 PINNAVTQQA GAAVLLPNEF DEDQRSSSTS SSSEFSSLVD ENKRLKQENG VLSSELTSMK 180 RKCKELLDLV AKYGDSAEKE EEDNERVLKL FGVRLEVTGE RERKRKRAEI SATANVLLSQ 240 ACK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41690.1	4e-68	HSF family protein