PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP024883.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 324aa    MW: 35645.5 Da    PI: 4.8596
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP024883.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.91e-092482881055
                  HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  r+RR++iN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  PCP024883.1 248 RKRREKINERLRVLQGLVPNG-----TKVDISTMLEEAVHYVKFLQ 288
                  9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MGIIPEAFWP GGYYEGALYY SSETSDSNSQ EGNLSGGTRT FYPTSSNESY YLNESSQPML  60
ATNNNNISMS IDFGAGDVIK TLNSYLIEGD HDQCLNQETS EGNPDECGRN PAEAVALGNQ  120
KFDMTAAQEQ SMEEINPTKN SLKRSQGLEN VQMKKMNIKA KKSRQVTTSN NEEDCTTARL  180
NRQSSSCCLV EDQSNVASHS HENSQELSGG VSVTSTSNLS PTVAALNLSG KSRARRGSAT  240
DPQSLYARKR REKINERLRV LQGLVPNGTK VDISTMLEEA VHYVKFLQLQ IKLLSSDDMW  300
MYAPICYNGI DLGLDPKLTT VQQS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1248253RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.12e-60bHLH family protein