PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP024884.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 349aa    MW: 38464.4 Da    PI: 4.5331
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP024884.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.11.8e-092793191055
                  HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  ++RR++iN ++  L+ l+P+      +K++ +++Le+A++Y+k Lq
  PCP024884.1 279 KKRREKINARLRILQNLVPNG-----TKVDLSTMLEEAIQYVKFLQ 319
                  9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MESAAAIANG RSSSLGAMYS SDEEAEFMSQ LLANCSVTNE MNEASSSAIP FAICPSYDFS  60
TSNLEGIYQG SQFSSEMANL YFSNGSSTYI MSNDETNHYI GNPNRIMETS YHNSESFHPW  120
DDNDTNLFPT QGEEYGMDQH QELSNINIEN QPGAAIYEKL LQLNRESDHE MAIREPAMEN  180
EVMVSENSKK RPCSSVDVLK NQRNVKAKKG QKAVSSGDIE DNDVSTKGQS SSSCCSGDDD  240
SINGSHHDLS RGVSTSILSP KGTKASRGLA TDSQSIYAKK RREKINARLR ILQNLVPNGT  300
KVDLSTMLEE AIQYVKFLQL QIKLLSSDDM WMFAPIAYNG INIGIDLNS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1279284KKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-48bHLH family protein