PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP024893.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 399aa MW: 45105.2 Da PI: 4.486

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP024893.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	81.4	1.8e-25	41	167	2	119
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk....sgyWkat 86 +G++F+Ptd+e++++ L+k+ g++ ++++ i +vd i+ ++P++Lp +vk + + +fF+++ k+y+tg+rk+r+++ + +W++t PCP024893.1 41 LKGVKFDPTDQEIIWHLLAKSGVGDQkphpfIDEF--ILTVDddegICCSHPRKLP-NVKLDGSPSHFFHRAIKAYNTGTRKRRKIHdgdgDVRWHKT 135 68************9999966555476543332..433322344******.667788999**************9883433446 PP NAM 87 gkdkevlskkgelvglkktLvfykgrapkgekt 119 g++k+v+ +g ++g+kk++v+y ++++++++ PCP024893.1 136 GRTKPVIL-DGVQKGCKKIMVLYMSTQQEAKQA 167 ****.99**********5555444432 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MFRSSLFLFD GSFIFNENWR TLKIRVFAIS FQVAQEWPGL LKGVKFDPTD QEIIWHLLAK 60 SGVGDQKPHP FIDEFILTVD DDEGICCSHP RKLPNVKLDG SPSHFFHRAI KAYNTGTRKR 120 RKIHDGDGDV RWHKTGRTKP VILDGVQKGC KKIMVLYMST QQEAKQADKT DQDVPESIDA 180 VITKVDPVTP NLVTPEPPRA EQKLGDFDLG LDTPAPSRDP FLQYRVEDGA EDEVHPDVDS 240 ALDEAHPEVN RAEDVRPESE IPDDYDQHKV ENQADEVINN TENIDHAQED PKWWDNESQN 300 LLDSQQLVEG LSLCDELLQS QSPNRGAHEN GEQAHVKPRL ADYAKLGPED LKKDLEACQN 360 IVLDPANIMD LDTPPDFRLS QLEFGSQESF LSWGGKVAD

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MFRSSLFLFD GSFIFNENWR TLKIRVFAIS FQVAQEWPGL LKGVKFDPTD QEIIWHLLAK  60
SGVGDQKPHP FIDEFILTVD DDEGICCSHP RKLPNVKLDG SPSHFFHRAI KAYNTGTRKR  120
RKIHDGDGDV RWHKTGRTKP VILDGVQKGC KKIMVLYMST QQEAKQADKT DQDVPESIDA  180
VITKVDPVTP NLVTPEPPRA EQKLGDFDLG LDTPAPSRDP FLQYRVEDGA EDEVHPDVDS  240
ALDEAHPEVN RAEDVRPESE IPDDYDQHKV ENQADEVINN TENIDHAQED PKWWDNESQN  300
LLDSQQLVEG LSLCDELLQS QSPNRGAHEN GEQAHVKPRL ADYAKLGPED LKKDLEACQN  360
IVLDPANIMD LDTPPDFRLS QLEFGSQESF LSWGGKVAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-119	NAC family protein