PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP024897.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 357aa    MW: 39735.7 Da    PI: 6.9039
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP024897.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.82.2e-14164210354
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  PCP024897.1 164 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 210
                  79*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MMCGKKEDQG ECSQSVQNLQ AFQEHLFLQQ QQHHQMQQQQ HHQMQQQQGL IFPHDHQPPP  60
PILQPWTLPP NHTFNPTAHD PFLLSTPPPI PSSSSYASFF NRRAPSLQLT YDGSASDHHH  120
HLRILSETLG PMVQPGSGPF GLQAELGKLT AQEIMDAKAL AASKSHSEAE RRRRERINNH  180
LAKLRSLLPS TTKTDKASLL AEVIQHVKEL KRQTSLIAET SPVPTETDEL LVDDESDEDG  240
KFVIKASLCC EDRSDLLPDL IKTLKALRLR TLKAEITTLG GRVKNVLFIT GEEDSSNSGG  300
EQVQMPHQQY CKSSIQEALK AVMEKTAGGG GDQDQSSSGS AKRQRTNNIN ILEHRSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1170175ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.12e-81bHLH family protein