PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP024937.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ARR-B

Protein Properties

Length: 670aa MW: 73298.3 Da PI: 6.2649

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP024937.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90.2	1.9e-28	213	266	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl PCP024937.1 213 KPRVVWSIELHQQFVGAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 266 79*****************.******************************8 PP
2	Myb_DNA-binding	37.6	4.9e-12	215	265	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ PCP024937.1 215 RVVWSIELHQQFVGAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 265 678***********************************************7 PP
3	Response_reg	75.9	1.5e-25	35	143	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+p+ +++l+++l+ y ev+ + +e+al ll+e++ +D+++ D+ mp+mdG++ll++ e +lp+i+++a + ++ + + + Ga PCP024937.1 35 VLVVDDDPTCLMILERMLRTCLY-EVTKCNRAESALSLLRENKngYDIVISDVHMPDMDGFKLLEQVGLEM-DLPVIMMSADDGKSVVMKGVTHGAC 129 89*******************.***********999999******************6644.8******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +e+l + PCP024937.1 130 DYLIKPVRIEALKN 143 ********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 670 aa Download sequence
MHLSNGMGSM STASSSGAWK SGDVVSDQFP AGLRVLVVDD DPTCLMILER MLRTCLYEVT 60 KCNRAESALS LLRENKNGYD IVISDVHMPD MDGFKLLEQV GLEMDLPVIM MSADDGKSVV 120 MKGVTHGACD YLIKPVRIEA LKNIWQHVVR KKKNEWRDVE QSGSVEEGDR QQKPSEDADY 180 SSSANEGSWK NSKRRKDEEE EMDERDDSST LKKPRVVWSI ELHQQFVGAV NQLGIDKAVP 240 KKILELMNVP GLTRENVASH LQKYRLYLRR LSGVSQHQNN LSNPFMSPQE ASFGAMSSLN 300 GLDLQTLAVT GQLPAQSLAT LQAAGLGRST GKSGIPIPLV DQRNLFSFEN PKQQHMSSGK 360 PMNLLHGIPT TMEAKQLANL HQSAQTLGAV NMQVNAHGVQ NSSLLMPVPQ SQPRGQILNE 420 TSGNHVPRHS SSMGQPIISN GMGSGVLGRN GIVDSSRGVG YNPVHQNSSM LNYPLNNSSQ 480 LPGNNFTLGS TPVMSSLASK GAFLEDVTSD IKRSSGFMPS YDMFNELQQP KSNEWDLQNV 540 GLTFDASQHT NSIHCSLDPS VLVHQGFSSS QRGGQSRNPS IVGKTMFSVG EGSHFGNMQN 600 TGQHLNGRIV DNTVRIKAET VPDATSQTSF FHEQFGQDDL MSALLKQQDG LGPAENEFDF 660 DGYSLDNIPV

Sequence ? help Back to Top

Protein Sequence Length: 670 aa Download sequence

MHLSNGMGSM STASSSGAWK SGDVVSDQFP AGLRVLVVDD DPTCLMILER MLRTCLYEVT  60
KCNRAESALS LLRENKNGYD IVISDVHMPD MDGFKLLEQV GLEMDLPVIM MSADDGKSVV  120
MKGVTHGACD YLIKPVRIEA LKNIWQHVVR KKKNEWRDVE QSGSVEEGDR QQKPSEDADY  180
SSSANEGSWK NSKRRKDEEE EMDERDDSST LKKPRVVWSI ELHQQFVGAV NQLGIDKAVP  240
KKILELMNVP GLTRENVASH LQKYRLYLRR LSGVSQHQNN LSNPFMSPQE ASFGAMSSLN  300
GLDLQTLAVT GQLPAQSLAT LQAAGLGRST GKSGIPIPLV DQRNLFSFEN PKQQHMSSGK  360
PMNLLHGIPT TMEAKQLANL HQSAQTLGAV NMQVNAHGVQ NSSLLMPVPQ SQPRGQILNE  420
TSGNHVPRHS SSMGQPIISN GMGSGVLGRN GIVDSSRGVG YNPVHQNSSM LNYPLNNSSQ  480
LPGNNFTLGS TPVMSSLASK GAFLEDVTSD IKRSSGFMPS YDMFNELQQP KSNEWDLQNV  540
GLTFDASQHT NSIHCSLDPS VLVHQGFSSS QRGGQSRNPS IVGKTMFSVG EGSHFGNMQN  600
TGQHLNGRIV DNTVRIKAET VPDATSQTSF FHEQFGQDDL MSALLKQQDG LGPAENEFDF  660
DGYSLDNIPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	0.0	ARR-B family protein