PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP024997.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

AP2

Protein Properties

Length: 538aa MW: 58909.6 Da PI: 5.9873

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP024997.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.1	5.8e-15	263	312	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g PCP024997.1 263 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 312 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MGSMNSNNWL SFPLSPPNSS LPSQLHPSHS HQFSLGLGSD TMDNPFQNQE WNLINTQGSD 60 EVPKVADFLG VSKSENHSDL VAFNDIQAND SVSDYLFPSN NIVSVQNTVV DNSSNFDFQE 120 KSNSLQSLTL SMGSGKGSSA CETSTDNTSI TTVEAPPRRT LDTFGQRTSI YRGVTRSIFT 180 SNLDTLRSCS LAFMVTGGYD KEEKAARAYD LAALKYWGTS TTTNFPISNY EKEVEEMKNM 240 TRQEFVAAIR RKSSGFSRGA SMYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTEEEAA 300 EAYDIAAIKF RGLNAVTNFD MSRYDVKSIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM 360 IALGSTFQYA AAGAASSSTS ASRNFQAYSL LQPQSTFDQN VQSQPLLTLQ NHDISQYTHH 420 HDPSSYQNYI QTQLQLHQTQ QQYHPTQQFY NSYGLQSTHP ALLQGLMDMG SSSGVMDHNN 480 GSSSGSYSAG GYLGNIGIGL ASNSTANNGV GSAEELALVK VDYDMPNGGG YGYFYNVE

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MGSMNSNNWL SFPLSPPNSS LPSQLHPSHS HQFSLGLGSD TMDNPFQNQE WNLINTQGSD  60
EVPKVADFLG VSKSENHSDL VAFNDIQAND SVSDYLFPSN NIVSVQNTVV DNSSNFDFQE  120
KSNSLQSLTL SMGSGKGSSA CETSTDNTSI TTVEAPPRRT LDTFGQRTSI YRGVTRSIFT  180
SNLDTLRSCS LAFMVTGGYD KEEKAARAYD LAALKYWGTS TTTNFPISNY EKEVEEMKNM  240
TRQEFVAAIR RKSSGFSRGA SMYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTEEEAA  300
EAYDIAAIKF RGLNAVTNFD MSRYDVKSIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM  360
IALGSTFQYA AAGAASSSTS ASRNFQAYSL LQPQSTFDQN VQSQPLLTLQ NHDISQYTHH  420
HDPSSYQNYI QTQLQLHQTQ QQYHPTQQFY NSYGLQSTHP ALLQGLMDMG SSSGVMDHNN  480
GSSSGSYSAG GYLGNIGIGL ASNSTANNGV GSAEELALVK VDYDMPNGGG YGYFYNVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	1e-174	AP2 family protein