PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP025025.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

BES1

Protein Properties

Length: 342aa MW: 36605.9 Da PI: 8.5398

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP025025.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	225.2	1.3e-69	3	154	1	150
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98 ++++r+ptwkErEnnk+RERrRRaiaakiy+GLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp ++++++g s+sasp+ss+q s+ PCP025025.1 3 TSGTRMPTWKERENNKKRERRRRAIAAKIYSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVDRMDIMGGSTSASPCSSYQPSP 100 5899******************************************************************************************** PP DUF822 99 kssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150 +s+ +sp +sy++sp+sssfpsp+++ + + +a +sl+p+l++ls+ sss+ PCP025025.1 101 CASYNPSPGASYNPSPASSSFPSPARYPANGNGNAdaNSLIPWLKTLSSGSSSA 154 **********************99987766566********9977765 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MMTSGTRMPT WKERENNKKR ERRRRAIAAK IYSGLRMYGN YKLPKHCDNN EVLKALCNEA 60 GWTVEEDGTT YRKGCKPVDR MDIMGGSTSA SPCSSYQPSP CASYNPSPGA SYNPSPASSS 120 FPSPARYPAN GNGNADANSL IPWLKTLSSG SSSATSKLPQ LFVQGGSISA PVTPPLSSPT 180 CRTPRTKSDW DEAVAGSNWA GQHYPFLPSS TPPSPGRQVL PDSGWLAGLQ IPQSGPSSPT 240 FSLVSRNPFN LKEALSGGGS RMWTPGQSGT CSPAVAAGID HTGDVPMSDG MAAEFAFGSN 300 TTGLVKPWEG ERIEECVSDD LELTLGSTRT RVFQLISYKY SE

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MMTSGTRMPT WKERENNKKR ERRRRAIAAK IYSGLRMYGN YKLPKHCDNN EVLKALCNEA  60
GWTVEEDGTT YRKGCKPVDR MDIMGGSTSA SPCSSYQPSP CASYNPSPGA SYNPSPASSS  120
FPSPARYPAN GNGNADANSL IPWLKTLSSG SSSATSKLPQ LFVQGGSISA PVTPPLSSPT  180
CRTPRTKSDW DEAVAGSNWA GQHYPFLPSS TPPSPGRQVL PDSGWLAGLQ IPQSGPSSPT  240
FSLVSRNPFN LKEALSGGGS RMWTPGQSGT CSPAVAAGID HTGDVPMSDG MAAEFAFGSN  300
TTGLVKPWEG ERIEECVSDD LELTLGSTRT RVFQLISYKY SE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-113	BES1 family protein