PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP025068.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 322aa MW: 36560.4 Da PI: 6.6544

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP025068.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50	7.1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed+ l +++k++G g+W+ +++ g++R++k+c++rw++yl PCP025068.1 14 RGAWTAHEDKVLTQYIKLHGEGRWRNLPKKAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	53.8	4.5e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ +++Edel+++++k+lG++ W++Ia +++ gRt++++k++w++ PCP025068.1 67 RGNISPDEDELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111 7899****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MGRSPCCAKE GLNRGAWTAH EDKVLTQYIK LHGEGRWRNL PKKAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SPDEDELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLGKKVHDQQ 120 QQRSASNLKH HKNGEPNSKN AKSTDMASPS SLVYRTKAAK CTQVFINPQP HKVLLAHDHQ 180 HCTEETNTVL MFDDKPAAMD DDHINRALSF SSFSNINADQ ENSTSDFLVD FDIASLLNSD 240 FPEINHDYLN HNNSDNITSH FVDETAQFFS EEMLQHWNNG GSDDGDDQVQ VQPNLALNFH 300 SFTSFLGSDH QGEEWLGVGE SN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	3e-63	MYB family protein