PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP025185.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family TCP
Protein Properties Length: 164aa    MW: 19070.4 Da    PI: 10.1037
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP025185.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP106.54.1e-3357129373
          TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa..sec 73 
                  ++kdrhs ++T++g+RdRR Rls ++a++f+d+qd+LG+d++sk+i+WL++++k+ai +l g++++ +   +c
  PCP025185.1  57 ARKDRHSNVYTSKGPRDRRFRLSPHTAIQFYDVQDRLGHDRPSKAIDWLIEKSKAAIEALSGSEQPCQyyYDC 129
                  79*************************************************************7777744344 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MLQQRESKNE KEENGDYQHV QDLMATSKSA FKQQQVDNTR YGKIVRVHGG HIVRSMARKD  60
RHSNVYTSKG PRDRRFRLSP HTAIQFYDVQ DRLGHDRPSK AIDWLIEKSK AAIEALSGSE  120
QPCQYYYDCT NSNVLDPHQF WKKLENKASI SFGITRKAIG SWKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31070.12e-37TCP family protein