PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP025235.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 410aa    MW: 43399.5 Da    PI: 8.4615
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP025235.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-19209258255
          AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+W+AeIrd +     + +r++lg+f tae Aa+a+++a+++++g
  PCP025235.1 209 RYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFETAEAAAQAYDQAALRFRG 258
                  7********.**********66.....56*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MSPIANIVLL IQTKGVLKKL GSTELGLVFC GWVVVFIVLK VANSRGNNDQ HADGQGGQRS  60
RGGAGGGILV SATSSMLLRL DREREMSVMV SALTHVVAGD DDEVAAAAPA CGNSDSGTSS  120
WSSVGTKRGR EEEEGGSGRG GAPLSESVTR LCRAFGEFPQ QIQRQSSAFG EGSTVRTRTT  180
EPTQTAFPPT PVSAYVYSAP EIAEPIRRRY RGVRQRPWGK WAAEIRDPFK AARVWLGTFE  240
TAEAAAQAYD QAALRFRGNK AKLNFPENVR LLLSTAVAPP TQLTPSAPQN TLLSVATSSE  300
SIVHSHAFHS SEEMASTSRN LVSYSMLADM QRQPMSLYDQ IVLSSSAATS AVATASSSSP  360
SFSSPSPPPF SSLSVIASAG PSISDNSTSA SDFLMQQWSG PIQYTTPSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.12e-29ERF family protein