PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP025242.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family FAR1
Protein Properties Length: 253aa    MW: 28387.9 Da    PI: 6.1861
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP025242.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR190.52.2e-2889176291
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                  fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++  k  r+raetr+gC+a++ v+k ++g+w+vtk+++eH+H+l+p
  PCP025242.1  89 FYNAYATRVGFIIRVSKLSRSRRDGSAIGRALVCNKEGYRMPDKRE--KVVRQRAETRVGCRAMILVRKVSSGNWVVTKFVKEHSHPLTP 176
                  ******************************************9988..999************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MVEFALDGDV DGEVVGSSAE MELSRAGDEN ETGGSSVEGA FQLGLDDKIN LDSPQGDIIP  60
EAVPVVSVVP ADEPYEGLEF ETEAAAHAFY NAYATRVGFI IRVSKLSRSR RDGSAIGRAL  120
VCNKEGYRMP DKREKVVRQR AETRVGCRAM ILVRKVSSGN WVVTKFVKEH SHPLTPGKGR  180
RDCIYDQYPN EHDKIRELSQ QLAIEKKRAA TYKRHLDLIF EHIEEHNESL SKKIQRVVES  240
VKEIEGKEQQ GYR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.23e-92FAR1 family protein