PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP025273.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 417aa    MW: 45886.3 Da    PI: 8.4593
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP025273.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH171.1e-05287328955
                  HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   r RR+r+ ++   L++llP++     kK++ a++  +A +YI+ Lq
  PCP025273.1 287 ARERRQRLSDKTRCLQKLLPWD-----KKMDSATTYGEAYKYIQFLQ 328
                  699******************9.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    
MDETERELRR AILSLSGRAD GGGEKDTACV TTGWDEEEAT FNAIMSSGIT FQPFLPITAS  60
ASAAHHHQNP MLPSSPSLKP LPYSNFAQDT LTNVSPATAA ASDYSHIPRL AKHEPISSYQ  120
DYFPTPTFYD YPPDLNLLPN THFSPPPPRH LQHHDCESND YSSIFQHLPD LLPLDPSNYF  180
PCSSSSSSSY KRPRFVDSHH FCYPSASFAA AVAAQHVHPY PPLPHFNNTT LFPPLNNNYG  240
FRPSSSSQSS SHANAPTPPP PPPPAPQVKT KRRITTPSPS LPGSALARER RQRLSDKTRC  300
LQKLLPWDKK MDSATTYGEA YKYIQFLQAQ LSALQTMPVL TPPTTSIATS SGRVGGELER  360
LSRNQLLQVL LNSPSAQTVM YSRGCCVFSV EQLDQISRRF SRKMGSSTAS KSSPPSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.18e-28bHLH family protein