PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP025447.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 143aa    MW: 15813.5 Da    PI: 4.9194
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP025447.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.13.7e-063759123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y+Cp+C+  F  ++nL +H++ H
  PCP025447.1 37 YTCPKCPCEFVFSENLDVHMSEH 59
                 9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MVNLPAAQQA KNVGSNLSLT ARIGTKRHLN KSKYALYTCP KCPCEFVFSE NLDVHMSEHQ  60
RIEDQTNRMT SSDFASRSIN SDCPMDHSQF TWCLEPLAGQ KLEATSPNSN ATASNEDGEN  120
EDMAREQVTL LTSSAENQGQ PCN